As I was savoring the last bite of my favorite Mexican haunt’s enchiladas, I realized something: why not create a version that embraces wholesome ingredients and a healthier profile? Enter these Healthy Chicken Enchiladas with Chipotle Sauce! This recipe not only infuses smoky heat from chipotle peppers but also packs a nutritional punch with black beans and whole wheat tortillas. You'll be amazed at how easy it is to whip up this comfort-food classic without sacrificing flavor or your wellness goals. The best part? They’re quick to prepare and perfect for meal prep, ensuring you can indulge without the guilt. Are you ready to elevate your weeknight dinners with a dish that feels indulgent yet nourishing?

Why are these enchiladas so special?
Wholesome Ingredients: Made with black beans and whole wheat tortillas, these enchiladas pack a nutritional punch and are low in sodium, making them a guilt-free indulgence.
Flavor Explosion: The rich, smoky kick from chipotle peppers creates an irresistible blend that tantalizes the taste buds, ensuring each bite is bursting with flavor.
Quick and Easy: In less than 30 minutes, you can whip up a delicious meal that’s perfect for busy weeknights.
Versatile Customization: Swap ingredients easily! Whether you want a vegetarian option with zucchini or prefer milder flavors with green chilies, this recipe adapts to your cravings.
Meal Prep-Friendly: Assemble ahead of time and simply bake when you’re ready to enjoy this comforting dish. You’ll find it’s a great way to eat healthier without fuss, just like these meal prep ideas.
With all these features, it's hard not to fall in love with these Healthy Chicken Enchiladas!
Healthy Chicken Enchiladas Ingredients
Here’s everything you need to create these deliciously healthy chicken enchiladas!
For the Enchiladas
- Whole Wheat Tortillas – Use as the base for these enchiladas; substitute with gluten-free corn tortillas if desired.
- Shredded Chicken – Provides lean protein; can be replaced with canned chicken for convenience (drain and rinse beforehand).
- Black Beans – Adds fiber and heartiness; optional for those who prefer other bean varieties.
- Corn – Offers sweetness and texture; thaw before adding—frozen or canned corn works perfectly.
- Onion – Enhances flavor; diced yellow or red onion is ideal, or use shallots as a mild alternative.
- Garlic – Infuses aromatic flavor; opt for fresh garlic, or use powdered in a pinch.
- Tomato Sauce – Forms the base for the enchilada sauce; choose low-sodium for a healthier option or make your own.
- Chipotle Peppers in Adobo Sauce – Brings a smoky heat; if you prefer less spice, smoked paprika is a great substitute.
- Oregano, Chili Powder, Cumin – A spice blend that deepens the flavor; fresh herbs enhance the dish even more.
- Low-Sodium Vegetable Broth – Provides liquid for the sauce; can swap with chicken broth for added depth of flavor.
- Mexican Cheese Blend – Melts wonderfully over the top for creaminess; use dairy-free cheese for a vegan alternative.
For Serving
- Fresh Cilantro – Garnish for added brightness and flavor; optional.
- Green Onions – Adds a fresh crunch and vibrant color; finely sliced for topping.
- Greek Yogurt or Avocado Slices – Optional toppings for creaminess and extra flavor, making your healthy chicken enchiladas even more delightful.
Get ready to savor the wholesome goodness of these Healthy Chicken Enchiladas!
Step‑by‑Step Instructions for Healthy Chicken Enchiladas
Step 1: Make the Sauce
In a medium saucepan, heat 1 tablespoon of olive oil over medium heat. Add 2 minced garlic cloves and sauté until fragrant, about 1 minute. Stir in 1 cup of tomato sauce, 2 chopped chipotle peppers in adobo sauce, and a teaspoon each of oregano, chili powder, and cumin. Pour in ½ cup of low-sodium vegetable broth, then let it simmer for 5-10 minutes until thickened and fragrant.
Step 2: Prepare Filling
In a large skillet, heat 1 tablespoon of olive oil over medium heat. Sauté ½ diced onion and another minced garlic clove until softened, about 3-4 minutes. Add 2 cups of shredded chicken, 1 cup of corn, and 1 can of black beans (drained and rinsed), along with a tablespoon of the prepared enchilada sauce. Cook for 4-5 minutes until heated through and well combined.
Step 3: Assemble Enchiladas
Preheat your oven to 400°F (200°C). On a clean surface, take each whole wheat tortilla and fill it with a heaping scoop of the chicken mixture and a sprinkle of Mexican cheese blend. Roll each tortilla tightly and place them seam-side down in a greased 9x13 inch baking dish, ensuring they are close together for stability.
Step 4: Top and Bake
Once your enchiladas are assembled, pour the remaining sauce evenly over the top, making sure each one is well-covered. Sprinkle an additional cup of cheese blend over everything and cover the dish with aluminum foil. Bake in the preheated oven for 20-25 minutes, removing the foil for the last 5 minutes to achieve that beautiful golden-brown topping.
Step 5: Finish and Serve
After baking, let your Healthy Chicken Enchiladas cool for about 5 minutes before serving. Garnish with freshly chopped cilantro and green onions, plus optional dollops of Greek yogurt or avocado slices to elevate the dish. Enjoy the delicious flavors and comforting textures you've created!

What to Serve with Healthy Chicken Enchiladas
Elevate your dining experience by accompanying these flavorful enchiladas with scrumptious sides that perfectly balance their rich taste.
- Crisp Mixed Green Salad: A refreshing salad with tangy dressing complements the spicy enchiladas, adding a vibrant crunch to each bite.
- Mexican-Style Rice: Fluffy, seasoned rice serves as a comforting base, soaking up the sauce and enhancing the meal's heartiness.
- Avocado Salsa: Creamy avocado adds a cool contrast to the spice in the enchiladas, creating a delightful tension of flavors.
- Black Beans with Lime: These flavorful beans echo the filling ingredients while the bright lime cuts through richness, making it a wholesome choice.
- Grilled Corn on the Cob: Sweet, smoky corn provides delightful texture and echoes the flavors of the enchiladas for a cohesive meal.
- Garlicky Roasted Vegetables: Roasted bell peppers and zucchini or other seasonal veggies add an earthy sweetness, rounding out the health-focused feast.
- Margaritas: Sip on a zesty margarita or a non-alcoholic limeade for a refreshing beverage that complements the smoky chipotle flavor.
- Churros with Dark Chocolate Dipping Sauce: For a sweet finish, serve crispy churros with a rich chocolate sauce, bringing joy to every endearing meal!
Healthy Chicken Enchiladas Variations
Feel free to explore these delightful twists that cater to your tastes and dietary needs!
- Vegetarian: Replace chicken with a mix of black beans and sautéed zucchini for a hearty option bursting with nutrients.
- Gluten-Free: Use gluten-free corn tortillas instead of whole wheat for a tasty, gluten-free experience.
- Spicy Kick: Add sliced jalapeños to the filling or top with a sprinkle of crushed red pepper for extra heat.
- Creamy Addition: Incorporate a dollop of Greek yogurt or cream cheese into the chicken mixture for a creamy texture.
- Mild Flavor: Substitute chipotle peppers with mild green chilies for a gentler flavor profile—perfect for kids!
- Smoky Depth: Incorporate smoked paprika into the sauce for an extra layer of smoky goodness without heat.
- Herbal Freshness: Add fresh cilantro, parsley, or subtle lime zest to the filling mix for a burst of fresh flavor.
- Extra Crunch: Top with crispy tortilla strips before serving for an added crunch that contrasts beautifully with the soft enchiladas.
Grab your apron, and don’t hesitate to mix things up—your Healthy Chicken Enchiladas will still shine, no matter how you customize them! If you're looking for more ideas, make sure to check out these meal prep ideas that perfectly complement your creations.
Make Ahead Options
These Healthy Chicken Enchiladas are a fantastic choice for meal prep, saving you time during those busy weeknights! You can assemble the enchiladas and refrigerate them for up to 24 hours before baking. Simply prepare the filling and sauce as directed, fill the tortillas, and place them in the baking dish. Cover tightly with plastic wrap or foil to maintain freshness and prevent drying out. When you’re ready to enjoy them, preheat your oven to 400°F (200°C), remove the covering, top with sauce and cheese, and bake as directed. This ensures that your enchiladas will be just as delicious as when freshly made!
Expert Tips for Healthy Chicken Enchiladas
Taste Testing: Adjust flavors: Always taste and adjust the seasoning of your sauce as it simmers for the best balance.
Warm Tortillas: Prevent Cracking: Warm your whole wheat tortillas in the microwave or on a skillet to help them roll easily without cracking.
Make Ahead: Efficient Meal Prep: Assemble enchiladas in advance and refrigerate them for up to 24 hours before baking to save time during busy weeknights.
Beans Variety: Customization: If black beans aren't your favorite, feel free to substitute them with pinto or kidney beans for a different flavor.
Healthy Swaps: Guilt-Free Ingredients: Use low-sodium options for broth and sauces to maintain the health profile of your deliciously healthy chicken enchiladas.
How to Store and Freeze Healthy Chicken Enchiladas
Fridge: Store leftovers in an airtight container for up to 4 days. Ensure they have cooled completely before sealing to prevent condensation.
Freezer: These enchiladas freeze well for up to 2 months. Wrap them tightly in plastic wrap, then place in a freezer-safe bag to avoid freezer burn.
Reheating: When ready to enjoy, reheat in a covered dish at 350°F (175°C) for about 20-25 minutes or until heated through. This ensures your Healthy Chicken Enchiladas remain moist and delicious!
Meal Prep Tip: Ready to serve from the fridge or freezer, these enchiladas are perfect for busy weeknights. Just assemble and refrigerate for later baking!

Healthy Chicken Enchiladas Recipe FAQs
How do I choose ripe tomatoes for the sauce?
Absolutely! Look for tomatoes that are firm yet slightly soft to the touch, indicating ripeness. The color should be rich and vibrant, without dark spots or blemishes. If you're using canned tomato sauce, opt for a no-salt-added or low-sodium variety to keep it healthier.
What’s the best way to store leftovers?
Very! Store your Healthy Chicken Enchiladas in an airtight container in the fridge for up to 4 days. Make sure they’ve cooled completely before sealing to prevent sogginess. If you want to enjoy them later, they can be frozen for up to 2 months. Just wrap them tightly in plastic wrap before placing them in a freezer-safe bag.
How can I freeze the enchiladas properly?
Certainly! To freeze your Healthy Chicken Enchiladas, first assemble them as per the recipe and let them cool completely. Wrap each enchilada individually in plastic wrap, ensuring every edge is sealed to avoid freezer burn. Place the wrapped enchiladas in a freezer-safe container or bag, and label with the date. They’ll stay fresh for up to 2 months!
What if my enchiladas are dry after baking?
If your enchiladas turn out dry, it might be due to overbaking or not using enough sauce. Always ensure to cover them with plenty of enchilada sauce before baking, and check the internal temperature; they are done when heated through but not dried out. A dash of broth can liven them up when reheating!
Can I make these enchiladas gluten-free?
Absolutely! To make these Healthy Chicken Enchiladas gluten-free, simply substitute the whole wheat tortillas with gluten-free corn tortillas. Be sure to check the labels on other ingredients, like the broth and sauces, for gluten content as well.
Are there any dietary considerations for pets or allergies?
Very! Always be cautious. While the ingredients in Healthy Chicken Enchiladas are wholesome for humans, avoid sharing them with pets, especially anything with garlic or onion, which can be harmful to dogs and cats. If you have allergies, consider modifying the recipe, such as using dairy-free cheese or omitting beans for legume allergies.

Deliciously Healthy Chicken Enchiladas You’ll Love
Ingredients
Equipment
Method
- Heat 1 tablespoon of olive oil in a medium saucepan over medium heat. Add 2 minced garlic cloves and sauté until fragrant, about 1 minute. Stir in 1 cup of tomato sauce, 2 chopped chipotle peppers, oregano, chili powder, cumin, and ½ cup of vegetable broth. Simmer for 5-10 minutes until thickened.
- In a large skillet, heat 1 tablespoon of olive oil over medium heat. Sauté ½ diced onion and another minced garlic clove for 3-4 minutes until softened. Add 2 cups of shredded chicken, 1 cup of corn, and 1 can of black beans along with a tablespoon of the prepared enchilada sauce. Cook for 4-5 minutes until heated through.
- Preheat your oven to 400°F (200°C). Fill each whole wheat tortilla with the chicken mixture and a sprinkle of cheese blend. Roll tightly and place seam-side down in a greased baking dish.
- Pour the remaining sauce over the enchiladas, cover with aluminum foil, and bake for 20-25 minutes. Remove foil for the last 5 minutes to brown the cheese.
- Let cool for 5 minutes before serving. Garnish with cilantro, green onions, and optional Greek yogurt or avocado slices.





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